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Software Resources

This page lists software tools, packages, and resources used in the lab.

Core Software

Python Packages

Package Version Purpose Installation
numpy >=1.20.0 Numerical computing pip install numpy
pandas >=1.3.0 Data manipulation pip install pandas
matplotlib >=3.4.0 Visualization pip install matplotlib
scipy >=1.7.0 Scientific computing pip install scipy

R Packages

Package Version Purpose Installation
tidyverse Latest Data science install.packages("tidyverse")
ggplot2 Latest Visualization install.packages("ggplot2")

Specialized Tools

[Tool Name 1]

Description: [Description of the tool]

Installation:

# Installation commands

Documentation: [Link to documentation]

Usage Example:

# Example code


[Tool Name 2]

Description: [Description of the tool]

Installation:

# Installation commands

Documentation: [Link to documentation]


Lab-Specific Scripts

[Script Name]

Purpose: [What the script does]

Location: [Where to find it]

Usage:

python scripts/script_name.py --input data.csv --output results.csv


Computing Resources

High-Performance Computing

  • Cluster: [Cluster name/access info]
  • Documentation: [Link to HPC docs]
  • Access: [How to get access]

Cloud Resources

  • Platform: [Cloud platform]
  • Access: [Access information]

Getting Help

  • Check package documentation
  • Ask in lab meetings
  • Contact: [Contact information]

Contributing

To add software to this list, update this file and submit a pull request.